treedata

anndata with trees


Keywords
anndata, bioinformatics, data-science, lineage-tracing, scanpy, scverse
License
Other
Install
pip install treedata==0.0.1

Documentation

treedata

Tests Documentation

anndata with trees

Getting started

Please refer to the documentation. In particular, the

Installation

You need to have Python 3.9 or newer installed on your system. If you don't have Python installed, we recommend installing Mambaforge.

There are several alternative options to install treedata:

  1. Install the latest development version:
pip install git+https://github.com/YosefLab/treedata.git@main

Release notes

See the changelog.

Contact

For questions and help requests, you can reach out in the scverse discourse. If you found a bug, please use the issue tracker.

Citation

t.b.a