moveHMM 1.4

Animal Movement Modelling using Hidden Markov Models

Homepage: https://github.com/TheoMichelot/moveHMM

Platform: CRAN

Language: R

License: GPL-3.0

View on registry: https://cran.r-project.org/package=moveHMM

Documentation: http://cran.r-project.org/web/packages/moveHMM/moveHMM.pdf

Direct download link: https://cran.r-project.org/src/contrib/moveHMM_1.4.tar.gz


moveHMM CRAN_Status_Badge License: GPL v3 Downloads

An R package for modelling animal movement with hidden Markov models.

Get started with the vignette: Guide to using moveHMM

Installation instructions

Stable release

The package is available on CRAN. To install it from CRAN, you can use the following commands:

# install dependencies
install.packages(c("Rcpp","RcppArmadillo","sp","CircStats"))
# install moveHMM
install.packages("moveHMM")

Install from Github

To install the latest (unstable) version of the package from Github:

install.packages(c("Rcpp","RcppArmadillo","sp","CircStats","devtools"))
library(devtools)
install_github("TheoMichelot/moveHMM", build_vignettes=TRUE)

References

Michelot, T., Langrock, R., Patterson, T.A. (2016). moveHMM: An R package for analysing animal movement data using hidden Markov models. Methods in Ecology and Evolution. 7(11), 1308-1315.

Langrock, R., King, R., Matthiopoulos, J., Thomas, L., Fortin, D., & Morales, J. M. (2012). Flexible and practical modeling of animal telemetry data: hidden Markov models and extensions. Ecology, 93(11), 2336-2342.

Patterson, T. A., Basson, M., Bravington, M. V., & Gunn, J. S. (2009). Classifying movement behaviour in relation to environmental conditions using hidden Markov models. Journal of Animal Ecology, 78(6), 1113-1123.


Imports Dependencies Requirements Latest Stable Latest Release Licenses
boot * 1.3-19 FSFUL
ggmap * 2.6.1 2.6.1 GPL-2.0
ggplot2 * 2.2.1 2.2.1 AML
MASS * 7.3-47 GPL-2.0+
Rcpp * 0.12.10 0.12.10 GPL-2.0+
sp * 1.2-4 GPL-2.0+
Explore the resolved imports dependency tree for moveHMM 1.4
Depends Dependencies Requirements Latest Stable Latest Release Licenses
CircStats * 0.2-4 GPL-2.0
Explore the resolved depends dependency tree for moveHMM 1.4
Suggests Dependencies Requirements Latest Stable Latest Release Licenses
knitr * 1.15.1 1.15.1 GPL-2.0+
testthat * 1.0.2 1.0.2 MIT
Explore the resolved suggests dependency tree for moveHMM 1.4

Releases

1.4 April 06, 2017
1.3 January 11, 2017
1.2 June 04, 2016
1.1 December 03, 2015
1.0 October 23, 2015

Project Statistics

SourceRank 7
Dependencies 0
Dependent projects 0
Dependent repositories 1
Total releases 5
Latest release
First release
Stars 3
Forks 1
Watchers 8
Contributors 3
Repo Size: 5.03 MB

Top Contributors See all

Théo Michelot RolandLangrock bmcclintock

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