Help Wanted

Benchmark against `ecs_bench` SuperV1234/ecst

[`ecs_bench`]( is a repository benchmarking multiple Rust ECS implementations. It would be cool to benchmark ecst using the same techniques/examples and comp...

Created - 0 comments - help wanted

Asynchronous DAG execution (no intermediate latches) SuperV1234/ecst

Currently every fork/join in the implicitly generated DAG has a `latch` that blocks until all the "fork subtasks" are executed. This is not optimal thread pool usage as blocking is not required her...

Created - 0 comments - enhancement help wanted

Investigate: allow users to define refresh event handlers in systems, and automagically detect th... SuperV1234/ecst


Created - 0 comments - enhancement help wanted

More inclusive naming for whitelist and blacklist plugins pypa/bandersnatch

Can we use other terms than `whitelist` and `blacklist` to represent the list of packages we are allowing and blocking? I know these are only names and that these terms have established meanings wi...

Created - 1 comment - 4.1 enhancement good first issue help wanted

The thread pool can freeze if all the tasks depend on something that's not being executed SuperV1234/ecst

Assumte that the thread pool has only 4 threads, and that there is a DAG path where 5 systems can be executed in parallel. The thread pool may deadlock as every system is waiting for its subtasks t...

Created - 1 comment - bug help wanted

Uncaught TypeError: $(...).catalogAddToCart is not a function Strategery-Inc/Magento2-InfiniteScroll

Hey there, We install this extension in magento 2.2.1 and we got below error Uncaught TypeError: $(...).catalogAddToCart is not a function. I don't test this with default so may be theme ...

Created - 1 comment - help wanted

Update Fastq interlacer/de-interlacer + paired_end_joiner to fix bug with compressed inputs galaxyproject/usegalaxy-playbook https://toolshed.g2.bx....

Created - 1 comment - help wanted

Prokka 1.12.0 failing with dep problem (Java version) galaxyproject/usegalaxy-playbook

**Tool**: **Prokka** prokaryotic genome annotation (Galaxy Version **1.12.0**) **MTS**: _Is the IUC version from the MTS really wh...

Created - 1 comment - bug help wanted

.gitattributes nekoas/Apollo13

Make `.gitattributes` file to prevent Linguist on GH tracking the vendor-provided stylesheets, scripts, etc.

Created - 1 comment - enhancement help wanted question

Update Stringtie tools to new version galaxyproject/usegalaxy-playbook

The current version: StringTie transcript assembly and quantification (Galaxy Version 1.3.3) Issue: Produces errors unless a very specific prep is done first. Reported as an usage error frequent...

Created - 2 comments - help wanted

Upgrade Plotting Tool version 1.0.1 to 1.0.2. Used in tutorials (v 1.0.1 does not work with it) galaxyproject/usegalaxy-playbook

MTS: Tool: Plotting Tool for multiple series and graph types | 1.0.2 Used in this GTN tutorial, section "Hands-on: Plot Rarefa...

Created - 2 comments - enhancement help wanted

Update Samtools Filter SAM or BAM - it fails to split on multiple regions and a fix has been made galaxyproject/usegalaxy-playbook

The version on Main seems to be not the most current version in the MTS. The version didn't get bumped, but a fix was made to address a specific problem that presents on Main (and in local tests co...

Created - 2 comments - bug help wanted

Extracting a workflow from a history results in a failure galaxyproject/usegalaxy-playbook

Might impact more than main test history I tried to extract from: If error result are included, this error: GURU ME...

Created - 3 comments - bug help wanted

Consider changing htseq_count's default sort option setting to Yes (currently is No and users are... galaxyproject/usegalaxy-playbook

**Tool**: htseq-count - Count aligned reads in a BAM file that overlap features in a GFF file (Galaxy Version 0.6.1galaxy3) Even though the tool help explains that the option **Force sorting of ...

Created - 4 comments - enhancement help wanted

Displaying all 14 issues