github.com/yogischogi/phylogrowth/phylotree

Calculates phylogenetic growth as a function of time.


License
GPL-3.0
Install
go get github.com/yogischogi/phylogrowth/phylotree

Documentation

Phylogrowth

Phylogrowth calculates phylogenetic growth from a phylogenetic tree as a function of time.

For each time interval it counts the number of new subclades and samples. The result is a historic "fingerprint" of a specific haplogroup that allows to draw conclusions about population growth and size.

Phylogenetic growth of the P312 haplogroup

The image shows the phylogenetic growth of the P312 haplogroup calculated from the YFull R1b tree.

Documentation