protvista-proteomics-adapter

A dataloader and parser (ProtVista compliant) for proteomics/peptide data imported in UniProt


Keywords
ProtVista, dataloader, parser, proteomics, peptides, nightingale, webcomponents, customelements, biohackeu21, biohackeu22, bioinformatics, visualization
License
MIT
Install
npm install protvista-proteomics-adapter@3.8.13

Documentation

Test and Publish Nightingale App

nightingale

Nightingale is a monorepo containing visualisation web components to use with biological data.

Cite us

Nightingale: web components for protein feature visualization, Bioinformatics Advances, Volume 3, Issue 1, 2023, vbad064, https://doi.org/10.1093/bioadv/vbad064

Documentation/Getting started

Documentation, getting started guide and examples for each of the components are available here https://ebi-webcomponents.github.io/nightingale

Contributing

Read our guide here as well as our code of conduct

Installing

Nightingale uses Lerna to manage its packages.

First run yarn to install root packages.

Building the components

Run yarn build

Showcase application

Locally

Run yarn build && yarn storybook to run the application locally.

Build

Run yarn build-storybook to build the application ready for deployment.