landcareresearch-supernova

Release 0.1.4

Repository Puppet Puppet Download

License
GPL-3.0+
Install
puppet module install landcareresearch-supernova --version 0.1.4

Documentation

Bitbucket Build Status

Manages the installation and configuration of De Novo Assembly Software.

Note

This software is not provided by nor supported by 10X Genomics.

System Requirements

The De Nova Assembly software (also known as supernova) requires a heavily resourced machine (per 2019 standards).

  • CPU : 16 min with 32 recommended
  • Memory : 256GB min with 512GB recommended
  • Storage : 500GB per genome being assembled
  • File System: ZFS (see note)

File System

The 10x Genomics does not make any recommendations on the file system. However, our experience has shown that the De Nova Assembly Software can produces too many small files for a standard ext4 file system to handle (runs out of inodes). ZFS does not have this issue and therefore is recommended by this module's maintainer.

API

See REFERENCE.md

Stats

Dependencies
2
Dependent packages
0
Dependent repositories
0
Total releases
3
Latest release
First release
Forks
0
Watchers
2
Contributors
0
Repository size
270 KB
SourceRank
5

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Releases

0.1.4
0.1.3
0.1.2

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