ChemDataExtractor-IDE

A toolkit for extracting chemical information from the scientific literature.


Keywords
text-mining, mining, chemistry, cheminformatics, nlp, html, xml, science, scientific
License
MIT
Install
pip install ChemDataExtractor-IDE==1.3.2

Documentation

ChemDataExtractor-IDE

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ChemDataExtractor-IDE is an extension of the ChemDataExtractor repository with the functionality to identify microscopy images automatically.

Installation

To install ChemDataExtractor, clone the repository with:

git clone https://github.com/edbeard/chemdataextractor-ide.git

and run:

python setup.py install

Then download the necessary machine learning models with:

cde data download

Documentation

This code is intended to be used with the ImageDataExtractor software toolkit for the automatic extraction of microscopy images. Full details on installation and integration with ChemDataExtractor-IDE can be found at [dummy].

Full documentation on the general use of ChemDataExtractor is available at http://chemdataextractor.org/docs

License

ChemDataExtractor is licensed under the MIT license, a permissive, business-friendly license for open source software.