A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data


Keywords
bioinformatics, database, immunology, python
License
Other
Install
pip install ImmuneDB==0.26.0

Documentation

ImmuneDB

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ImmuneDB is a Python module that facilitates efficient storage and analysis of high-throughput B- and T-cell sequence data.

Documentation

Installation and usage instructions can be found at immunedb.com

Citing

If you use ImmuneDB, please cite the tool as:

Rosenfeld, A. M., Meng, W., Luning Prak, E. T., Hershberg, U. ImmuneDB, a Novel Tool for the Analysis, Storage, and Dissemination of Immune Repertoire Sequencing Data. Frontiers in Immunology 9 (2018).

ImmuneDB was originally announced previously in:

Aaron M. Rosenfeld, Wenzhao Meng, Eline T. Luning Prak, and Uri Hershberg, ImmuneDB: a system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data, Bioinformatics 33 (2016), no. 2, 292–293.