aimes.bundle

Bundle based Information System for AIMES


Keywords
aimes, bundle
License
MIT
Install
pip install aimes.bundle==0.1.1

Documentation

Bundle

'bundle_manager' is the major module provided by 'bundle'

'bundle' depends on the following third party library to run:
paramiko (A Python SSHv2 protocal library) Pyro4* (Python Remote Objects, needed only when using Bundle as a remote object)

Usage example:

Before using bundle_manager, user needs to create a configuration file.
src/bundle/example/bundle_credentials.txt is a template configuration file

There are two ways to use bundle_manager. The first way is to directly import bundle_manager as a library.

src/bundle/example/bundle_cml.py shows an example of using bundle_manager in this way.

The second way is to launch bundle_manager as a deamon, register it with Pyro4 as a remote object. User program should query Pyro4 with bundle_manager's uri to get a reference to the remote object and call thie remote object's functions

src/bundle/example/bundle_cmlPyro.py shows an example of using bundle_manager in this way.

A screen copy of results on india.futuregrid.org (using aboved mentioned first way)

fengl@exa (/home/grad03/fengl/DOEProj) % ls bundle_cml.py bundle bundle_cml.py*

bundle: api/ bundle_credentials.txt db/ impl/ __init__.py __init__.pyc tools/ fengl@exa (/home/grad03/fengl/DOEProj) % cat bundle/bundle_credentials.txt #bundle cluster credential file #each line contains credential of a cluster, used for launching a remote connection to the cluster #accepted credential fields include: hostname, port, username, password, key_filename finished_job_trace=/home/grad03/fengl/DOEProj/bundle/db cluster_type=moab hostname=india.futuregrid.org username=liux2102 key_filename=/home/grad03/fengl/.ssh/id_rsa h_flag=True #cluster_type=moab hostname=xray.futuregrid.org username=liux2102 key_filename=/home/grad03/fengl/.ssh/id_rsa #cluster_type=moab hostname=hotel.futuregrid.org username=liux2102 key_filename=/home/grad03/fengl/.ssh/id_rsa #cluster_type=moab hostname=sierra.futuregrid.org username=liux2102 key_filename=/home/grad03/fengl/.ssh/id_rsa #cluster_type=moab hostname=alamo.futuregrid.org username=liux2102 key_filename=/home/grad03/fengl/.ssh/id_rsa fengl@exa (/home/grad03/fengl/DOEProj) % ~/virtualenv/bin/python bundle_cml.py Enter command: loadc bundle/bundle_credentials.txt 2013-10-29 17:11:39,251 india.futuregrid.org india.futuregrid.org INFO __init__:112 Connected to india.futuregrid.org Enter command: list ['india.futuregrid.org'] Enter command: showc india.futuregrid.org {'state': 'Up', 'num_procs': 248, 'pool': {'compute': {'np': 8, 'num_procs': 168, 'num_nodes': 21}, 'b534': {'np': 8, 'num_procs': 8, 'num_nodes': 1}, 'delta': {'np': 12, 'num_procs': 72, 'num_nodes': 6}}, 'queue_info': {'bravo': {'started': 'True', 'queue_name': 'bravo', 'enabled': 'True', 'pool': 'bravo', 'max_walltime': 86400}, 'batch': {'started': 'True', 'queue_name': 'batch', 'enabled': 'True', 'pool': 'compute', 'max_walltime': 86400}, 'long': {'started': 'True', 'queue_name': 'long', 'enabled': 'True', 'pool': 'compute', 'max_walltime': 604800}, 'delta-long': {'started': 'True', 'queue_name': 'delta-long', 'enabled': 'True', 'pool': 'delta', 'max_walltime': 604800}, 'delta': {'started': 'True', 'queue_name': 'delta', 'enabled': 'True', 'pool': 'delta', 'max_walltime': 86400}, 'b534': {'started': 'True', 'queue_name': 'b534', 'enabled': 'True', 'pool': 'b534', 'max_walltime': 604800}, 'ib': {'started': 'True', 'queue_name': 'ib', 'enabled': 'True', 'pool': 'compute', 'max_walltime': 86400}, 'interactive': {'started': 'True', 'queue_name': 'interactive', 'enabled': 'True', 'pool': 'compute', 'max_walltime': 86400}}, 'num_nodes': 28} Enter command: showw india.futuregrid.org {'free_procs': 208, 'per_pool_workload': {'compute': {'free_procs': 128, 'free_nodes': 16, 'alive_nodes': 21, 'busy_nodes': 5, 'np': 8, 'busy_procs': 40, 'alive_procs': 168}, 'b534': {'free_procs': 8, 'free_nodes': 1, 'alive_nodes': 1, 'busy_nodes': 0, 'np': 8, 'busy_procs': 0, 'alive_procs': 8}, 'delta': {'free_procs': 72, 'free_nodes': 6, 'alive_nodes': 6, 'busy_nodes': 0, 'np': 12, 'busy_procs': 0, 'alive_procs': 72}}, 'free_nodes': 23, 'alive_nodes': 28, 'busy_nodes': 5, 'busy_procs': 40, 'alive_procs': 248} Enter command: quit 2013-10-29 17:12:17,222 india.futuregrid.org india.futuregrid.org DEBUG close:1003 close 2013-10-29 17:12:17,222 india.futuregrid.org india.futuregrid.org DEBUG run:607 received "close" command cmd_line_loop finish

A screen copy of results on india.futuregrid.org (using aboved mentioned second way)

fengl@exa (/home/grad03/fengl) % ~/virtualenv/bin/python -m Pyro4.naming /home/grad03/fengl/virtualenv/local/lib/python2.7/site-packages/Pyro4/core.py:167: UserWarning: HMAC_KEY not set, protocol data may not be secure

warnings.warn("HMAC_KEY not set, protocol data may not be secure")

Not starting broadcast server for localhost. NS running on localhost:9090 (127.0.0.1) URI = PYRO:Pyro.NameServer@localhost:9090

#Open another terminal fengl@exa (/home/grad03/fengl/DOEProj) % ~/virtualenv/bin/python bundle/impl/bundle_manager.py -D -c bundle/bundle_credentials.txt daemon mode 2013-10-29 16:05:12,393 india.futuregrid.org india.futuregrid.org INFO __init__:112 Connected to india.futuregrid.org 2013-10-29 16:05:12,393 INFO:india.futuregrid.org:bundle_agent.py:112:Connected to india.futuregrid.org /home/grad03/fengl/virtualenv/local/lib/python2.7/site-packages/Pyro4/core.py:167: UserWarning: HMAC_KEY not set, protocol data may not be secure

warnings.warn("HMAC_KEY not set, protocol data may not be secure")
Object <__main__.BundleManager object at 0x1c59f90>:
uri = PYRO:obj_9262a45a566a46f39c4fad5288fbf9ae@localhost:41540 name = BundleManager

Pyro daemon running.

#Check bundle_manager has successfully registered itself as a remote object to Pyro4 fengl@exa (/home/grad03/fengl) % ~/virtualenv/bin/python -m Pyro4.nsc list /home/grad03/fengl/virtualenv/local/lib/python2.7/site-packages/Pyro4/core.py:167: UserWarning: HMAC_KEY not set, protocol data may not be secure

warnings.warn("HMAC_KEY not set, protocol data may not be secure")

--------START LIST BundleManager --> PYRO:obj_9262a45a566a46f39c4fad5288fbf9ae@localhost:41540 Pyro.NameServer --> PYRO:Pyro.NameServer@localhost:9090 --------END LIST

AIMES

AIMES is a DOE ASCR funded collaborative project between the RADICAL group at Rutgers, University of Minnesota, and the Computation Institute at the University of Chicago, that will explore the role of abstractions and integrated middleware to support science at extreme scales. AIMES will co-design middleware from an application and infrastructure perspective. AIMES will provide abstractions for compute, data and network, integrated across multiple levels to provide an interoperable, extensible and scalable middleware stack to support extreme-scale science.

AIMES is funded by DOE ASCR under grant numbers: DE-FG02-12ER26115, DE-SC0008617, and DE-SC0008651