Easy Resting State Analysis with Python


Keywords
easy-to-use, machine-learning, neuroimaging, python, resting-state-fmri, statistics
License
BSD-3-Clause
Install
pip install conpagnon==2.0.11

Documentation

ConPagnon

ConPagnon is a Python module designed to facilitate the analysis of Resting State data.

It leverages, among others, the scikit-learn Python toolbox, and the nilearn Python toolbox. ConPagnon also contain numerous utilities for manipulating text data, visualizing and plotting results.

Important links

Dependencies

The required dependencies to use the software are:

  • Python >= 3.6,
  • setuptools
  • Numpy
  • SciPy
  • Scikit-learn
  • Joblib
  • Nibabel
  • PyPDF2
  • Webcolors
  • Seaborn
  • Pandas
  • Statsmodels
  • Psutil
  • Networkx
  • Patsy
  • xlrd
  • tabulate

Install

First make sure you have installed all the dependencies listed above. Then you can install ConPagnon by running the following command in a command prompt:

pip install conpagnon

More detailed instructions are available at https://conpagnon.github.io/conpagnon/install.html.

Contributors

Dhaif BEKHA