coolclip

A small tool for clip the cooler file


Keywords
genomics
License
GPL-3.0
Install
pip install coolclip==0.0.1

Documentation

CoolClip

Clip the cooler file to a small subset within specified regions. Used for create example dataset for cooler based software test/debug/demonstration.

I want to extract a small subset of .cooler file and create a new one, but found cooler not support that.

So this is a small tool for clip the cooler file.

Maybe cooler will support this in the feature, this will be deprecated.

Install

$ pip install coolclip

Usage

$ coolclip --help