dimedbpy

Python wrapper for DIMEdbs REST API.


Keywords
metabolomics, omics, processing, bioinformatics, chemical-elements, chemical-formulas, metabolic-models, python
License
GPL-3.0
Install
pip install dimedbpy==0.1.2

Documentation

dimedbpy: Python wrapper for the DIMEdb REST API

dimedbpy provides a way to interact with the DIMEdb web service in Python. It provides metabolite queries by name, structure, and adduct information.

Here's a quick example, showing how to retrieve metabolites by its name:

from dimedbpy import get_metabolites

metabolites = get_metabolites("name", "Caffeine")

for metabolite in metabolites:
    print metabolite.adducts

Resources

License

Code released under the MIT license.