donutda

Donut-like Object segmeNtation Utilizing Topological Data Analysis


License
MIT
Install
pip install donutda==1.0

Documentation

DONUTDA

A python based semi-supervised software for Donut-like Object segmeNtation Utilizing Topological Data Analysis.

DONUTDA implements persistent homology to perform image analysis on biomedical image data. Taking a 2d-grayscale image as an input, there are four easy steps for algorithm to spit out the desired masks of the regions of interest(ROI).

The GUI is available.