ephypype

Python package providing pipelines for electrophysiological (EEG/MEG) data within nipype framework.


Keywords
connectivity, electrophysiology, mne-python, nipype
License
BSD-1-Clause
Install
pip install ephypype==0.5

Documentation

https://travis-ci.org/neuropycon/ephypype.svg?branch=master https://circleci.com/gh/neuropycon/ephypype.svg?style=svg

README

Description

Neuropycon package of functions for electrophysiology analysis, can be used from graphpype and nipype

Documentation

https://neuropycon.github.io/ephypype

Installation

Requirements

ephypype works with python3

The dependencies (mne, nipype) are automatically installed during ephypype installation (see :ref:`ephy_install`).

We also recommend to install MNE python by following the installation instructions

Install ephypype

To install ephypype, use the following command:

$ pip install ephypype

or alternatively, you can download from github the last version and install it:

$ git clone https://github.com/neuropycon/ephypype.git
$ cd ephypype
$ python setup.py develop

Software

Freesurfer
  1. Download Freesurfer software:

https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall

  1. Follow the Installation instructions

https://surfer.nmr.mgh.harvard.edu/fswiki/LinuxInstall