Frisk

Warning: This package is under active development and testing, results may be unstable!

Screen genomic scaffolds for regions of unusual k-mer composition.

Install

Frisk is a python package. On almost any modern operating system, the following should work:

pip install cython numpy scipy  # Install depenencies
pip install hmmlearn
pip install frisk

Documentation

Is currently being written, and will appear at frisk.rtfd.org as it is completed.

License

Frisk is licensed under the GNU GPL version 3, or (at your option) any later version. See ./LICENSE for the full license text.