h5features

The h5features python package provides easy to use and efficient storage of large features data on the HDF5 binary file format.

Installation from conda

conda install -c coml h5features

Installation from pip

pip install h5features

Installation from sources

• dependencies

  The package depends on numpy, scipy and h5py. They can be automatically installed by the setup script but it takes a long time (full compilation). You may want to install the dependancies through your system package manager.

  On Debian/Ubuntu:

  sudo apt-get install python3-numpy python3-scipy python3-h5py
  

  Using Python anaconda:

  conda install numpy scipy h5py
  

• h5features

  Install it from the sources with:

  python setup.py build && python setup.py install
  

Documentation

• See the complete documentation online

• Or build it with:

  pip install Sphinx
  cd docs && make html
  

  The home page of the compiled documentation is docs/_build/html/index.html.

Test

The package comes with a unit-tests suit. To run it, first install pytest on your Python environment:

pip install pytest

Then run the tests with:

pytest -v ./test