iva

Release 1.0.9

Iterative Virus Assembler

Homepage PyPI Python

Keywords
bioinformatics, bioinformatics-pipeline, genomics, global-health, infectious-diseases, next-generation-sequencing, pathogen, research, sequencing
License
GPL-3.0
Install
pip install iva==1.0.9

Documentation

IVA - Iterative Virus Assembler

IVA is a de novo assembler designed to assemble virus genomes that have no repeat sequences, using Illumina read pairs sequenced from mixed populations at extremely high and variable depth.

Please see the IVA website IVA website for more information, including installation instructions.

For usage help and examples, see the IVA wiki page IVA wiki page.

Build status: Build Status

Stats

Dependencies
0
Dependent packages
0
Dependent repositories
0
Total releases
16
Latest release
First release
Stars
42
Forks
17
Watchers
13
Contributors
8
Repository size
8.46 MB
SourceRank
11

Development practices

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Dependencies are managed
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Issue-free release available
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Succession plan available
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Releases

1.0.9
1.0.8
1.0.6
1.0.5
1.0.4
1.0.3
1.0.2
1.0.1
1.0.0
0.11.7
See all 16 releases

Contributors

martinghunt Sascha Steinbiss andrewjpage John Tate aslett1 Sara Sjunnebo Ben Taylor nds


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