jellypy-tierup

Find GeL Tier 3 variants with Green PanelApp genes


License
MIT
Install
pip install jellypy-tierup==0.2.0a0

Documentation

JellyPy

jellypy_logo

Python packages for juggling GeL data

Find documentation at https://acgs.gitbook.io/jellypy

Batteries included:

  • jellypy-pyCIPAPI : Client library for the Clinical Interpretation Portal
  • jellypy-tierup : Find Tier 3 variants to PanelApp Green genes

Contributing

Please raise an issue to request new functions or features: https://github.com/NHS-NGS/JellyPy/issues

To develop a new function or feature, please take a look at the issues raised. If there's something that you would like to code up, then (you are awesome and) start a discussion in the #jellypy channel at https://binfx.slack.com/messages

Changelog

jellypy-pyCIPAPI

  • 0.1.0 - Make JellyPy a namespace package
  • 0.2.0 - Update pyCIPAPI to work with GeL client token/secret GMS authentication
  • 0.2.1 - Support legacy authentication by allowing AD to be toggled on/off in config file
  • 0.2.2 - Add sub-heading to README changelog
  • 0.2.3 - Update live 100K url. Display response on API errors. Add tests for auth api calls.

jellypy-tierup

  • 0.2.0 - TierUp development release with pyCIPAPI 0.2.3