jit-open

Just in time open files


Keywords
bioinformatics
License
MIT
Install
pip install jit-open==1.0.2

Documentation

Just in time open files.

This package provides a way to delay opening files until the something is written to the file handle. This can be convenient when opening a large number of files of which most of them will not be frequently used. To deal with resource limits a queue is used from which, when full, the least frequent file is closed.

Installation

The software is distributed via PyPI, it can be installed with pip:

pip install jit_open

From source

The source is hosted on GitHub, to install the latest development version, use the following commands.

git clone https://git.lumc.nl/j.f.j.laros/jit-open
cd jit_open
pip install .

Usage

In the following example, only the file used.txt is created.

>>> from jit_open import Handle, Queue
>>>
>>> queue = Queue()
>>> used = Handle("used.txt", queue)
>>> unused = Handle("unused.txt", queue)
>>>
>>> used.write("line 1\n")
>>> used.write("line 2\n")

Library

The library provides the Handle and Queue classes.