A pipeline submission engine that parses sample inputs and submits pipelines for each sample.


Keywords
bioinformatics, sequencing, ngs, bioinformatics-pipeline, pipeline-submission-engine
License
BSD-3-Clause-Attribution
Install
pip install loopercli==0.12.6

Documentation

looper logo

Build Status PEP compatible

Looper is a pipeline submission engine. The typical use case is to run a bioinformatics pipeline across many different input samples. Instructions are in the documentation.