multiworm

Python interface for Multi-Worm Tracker data


Keywords
c, elegans, caenorhabditis, worm, tracking, biology, amaral
License
MIT
Install
pip install multiworm==0.1.1

Documentation

Multiworm

Reads data from the Multi-Worm Tracker (MWT) program by the Kerr Lab [Swierczek] and exposes it in a clean, easy-to-use interface. Used by WALDO, a data-cleaner for the MWT developed by the Amaral Lab [Winter].

[Swierczek] NA Swierczek, AC Giles, CH Rankin, RA Kerr. (2011) "High-throughput behavioral analysis in C. elegans" Nature Methods doi:10.1038/nmeth.1625
[Winter] P Winter, RM Brielmann, N Timkovich, HT Navarro, A Teixeira-Castro, R Morimoto, LAN Amaral (accepted, pending publication) "A network approach to discerning the identities of C. elegans in a free moving population" Scientific Reports