A package for parsing ontologies in the OWL and OBO format into NetworkX graphs

Ontologies, Controlled, Vocabularies, terminologies, text-mining
pip install onto2nx==0.1.1


onto2nx Build Status Code coverage Status zenodo

Converts OWL ontologies and OBO to NetworkX Graphs.

As of its first version, onto2nx currently relies on the code of a stripped-down version of OntoSpy. We would like to give a huge thank you to Michele Pasin for all of his hard work and making it available under the GPL 3.0 license so we could use it too.

Installation Supported Python Versions Current version on PyPI GPL 3.0 License

PyBEL can be installed easily from PyPI with the following code in your favorite terminal:

$ python3 -m pip install onto2nx

or from the latest code on GitHub with:

$ python3 -m pip install git+https://github.com/cthoyt/onto2nx.git