papillon

A Python module to read and plot (cuffdiff) Galaxy RNA-seq data


Keywords
cuffdiff, cufflinks, cummerbund, galaxy-project, genes, heatmap, isoforms, plot, rna-seq, transcript
License
MPL-2.0
Install
pip install papillon==0.2.0

Documentation

Papillon

A python alternative to cummeRbund to read and plot Galaxy/cuffdiff RNA-seq data

Preview

PyPI version Python3 Pandas Seaborn Build Status codecov

Installation

You can use Papillon with any Scientific IDE, and install it using Pypi:

pip install papillon

or Anaconda with conda-forge channel:

conda config --add channels conda-forge
conda install papillon

Usage

Quick Tutorial.

Wiki.