Partycool

Particle Size Analysis Package for All Microscopy Images

This package can be used to analyze the particle size from microscopy images such as FEM, SEM images and optical microscopy. We will try to implement also the recignition of AFM images through Machine Learning. In addition, there is a visualization tools that can be used to plot the size distribution of the particles.

Contributers: Muammer Yaman, Ximin Hu, Margherita Taddei, Yangwei Shi

Release date: 2020-03-16

Organization of the project

The project has the following structure:

partycool/
  |- README.md
  |- partycool/
     |- __init__.py
     |- core.py
     |- tests/
        |- __init__.py
        |- test_core.py
  |- doc/
     |- technology_review.pdf
  |- example_images/
     |- train/
     |- darkfield/
     |- optic/
     |- sem/
  |- trial/
     |- .gitignore
     |- Pytorch-tutorial.ipynb
     |- Shape_detection.ipynb
     |- cifar_net.pth
     |- dog.jpg
     |- region_of_interest_scalebar.ipynb
     |- shape.png 
  |- .travis.yml
  |- .gitignore
  |- environment.yml
  |- LICENSE
  |- function_list.py
  |- partycool.ipynb    
  |- partycool_my.ipynb
  |- requirements.txt
  |- test

How to install

pip install partycool

Software dependencies

• Python3

Preview of app

• Categories of nanoparticles

• Statistics distribution