pypfilt

Release 0.8.2

Bootstrap particle filter for epidemic forecasting

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License
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Install
pip install pypfilt==0.8.2

Documentation

Bootstrap particle filter for epidemic forecasting

Description

This package implements a bootstrap particle filter, intended for use with mechanistic infection models to generate forecasts for epidemic outbreaks.

Documentation

The documentation is available online and can be built locally with sphinx:

python setup.py build_sphinx

Note that the sphinx_rtd_theme theme must be installed.

License

The code is distributed under the terms of the BSD 3-Clause license (see LICENSE), and the documentation is distributed under the terms of the Creative Commons BY-SA 4.0 license.

Installation

Clone this repository and execute:

python setup.py install

If you don't have admin rights, install the package locally:

python setup.py install --user

Dependencies

This package requires h5py 2.2 or newer, NumPy 1.8 or newer, and SciPy 0.11 or newer.

Stats

Dependencies
7
Dependent packages
3
Dependent repositories
1
Total releases
16
Latest release
First release
Forks
1
Contributors
0
Repository size
9.96 MB
SourceRank
7

Development practices

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Releases

0.8.0
0.8.2
0.8.1
0.7.2
0.7.1
0.7.0
0.6.1
0.6.0
0.5.5
0.5.4
See all 16 releases

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