racpy
RNASeq Age Calculation in Python
- Free software: MIT license
- Documentation: https://racpy.readthedocs.io.
Features
This is the Python verion of our proposed multi-tissue transcriptional age calculator.
- The RNAAgeCalc paper can be found here https://doi.org/10.1371/journal.pone.0237006.
- The Python package can be found here https://pypi.org/project/racpy.
- The Python package documentation can be found here https://racpy.readthedocs.io.
- An interactive Shiny App can be found here https://xuren2120.shinyapps.io/RNAAgeCalcshiny/.
- The Shiny App demo can be found here http://www.ams.sunysb.edu/~pfkuan/RNAAgeCalc/instructions.html.
- The R version can be found here https://bioconductor.org/packages/release/bioc/html/RNAAgeCalc.html.
Authors
Credits
This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.
Dependencies scanned by PyUp.io
Citation
Ren, X., & Kuan, P. F. (2020). RNAAgeCalc: A multi-tissue transcriptional age calculator. PloS one, 15(8), e0237006.
@article{ren2020rnaagecalc,
title={RNAAgeCalc: A multi-tissue transcriptional age calculator},
author={Ren, Xu and Kuan, Pei-Fen},
journal={PLOS ONE},
volume={15},
number={8},
pages={1-21},
year={2020},
publisher={Public Library of Science}
}
