RNA Contamination Detector
rna_cd is a python package and command line tool designed to detect RNA contamination of DNA-seq experiments.
For our complete documentation, please checkout our readthedocs page.
Requirements
- Python 3.5+
- click
- scikit-learn
- pysam
- matplotlib
Installation
PyPI
$ pip install rna-cd
Conda
- ::
- $ conda install -c bioconda rna-cd
License
AGPLv3+