Shape-Out is a graphical user interface for the analysis and visualization of RT-DC data sets. For more information please visit https://zellmechanik.com/.

Please consider migrating your analysis pipeline to Shape-Out 2. The differences between Shape-Out 1 and Shape-Out 2 are discussed in the Shape-Out 2 docs.

Documentation

The documentation is available at https://shapeout.readthedocs.io.

Installation

Installers for Shape-Out are available at the release page.

Citing Shape-Out

Please cite Shape-Out either in-line

(...) using the analysis software Shape-Out version X.X.X (available at
https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut).

or in a bibliography

Paul Müller and others (2015), Shape-Out version X.X.X: Analysis software
for real-time deformability cytometry [Software]. Available at
https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut.

and replace X.X.X with the version of Shape-Out that you used.

Development

Details on running Shape-Out from source, contributing, testing, and releasing new versions of Shape-Out can be found at https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut/tree/develop/DEVELOP.rst.