treeducken-tools

treeducken_tools: a simulation study for testing sampling of DTL models


License
MIT
Install
pip install treeducken-tools==0.1.dev0

Documentation

Treeducken tools

A Python module for assistance in running the treeducken software.

Features currently implemented:

  • wrapper for running treeducken
  • wrapper for generating sequence data using Seq-Gen
  • functions for determining the expected tree length given number of tips and birth and death rate, expected gene family size given gene birth and death rates