uniprotmapper
A little package for running mapping requests through UniProt's online API.
installation
Download the .zip to your favorite directory on your local machine, cd
there and run the command:
$ python setup.py install
Alternatively, one can:
$ pip install uniprotmapper
example
Here is an example:
import uniprotmapper as um
mymapper = um.Mapper()
mymapper.params.update({"to":"WORMBASE_ID",
"from":"ID",
"organism":"6239",
"format":"tab"})
myquery = {"query":["some gene", "some gene", "some gene", "some gene"]}
response = mymapper.get_data(myquery)
#alternatively
mymapper.params.update(myquery)
response = mymapper.get_data()Have fun! :D
