Bioconductor/BiocParallel
Bioconductor facilities for parallel evaluation
R - Last pushed - 19 stars - 13 forks
varemo/piano
piano - An R/Bioconductor package for gene set analysis
R - Last pushed - 4 stars
catavallejos/BASiCS
BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental versio...
R - Last pushed - 61 stars - 12 forks
hemberg-lab/scmap
A tool for unsupervised projection of single cell RNA-seq data
R - Last pushed - 13 stars - 5 forks
adeschen/similaRpeak
Bioconductor Package - Metrics to estimate the level of similarity between two ChIP-Seq profils
R - Last pushed - 4 stars - 1 forks
nhejazi/methyvim
package microscope R/methyvim: Variable importance methods for differential methylation analy...
R - MIT - Last pushed - 2 stars - 1 forks
kevinrue/unisets
Collection of classes to store gene sets.
R - Other - Last pushed - 3 stars - 1 forks
Bioconductor/geneplotter
Graphics related functions for Bioconductor
R - Last pushed - 1 stars
nhejazi/biotmle
package microscope R/biotmle: Model-free biomarker discovery using moderated statistics and T...
R - MIT - Last pushed - 0 stars - 1 forks
Bioconductor/ensemblVEP
R Interface to Ensembl Variant Effect Predictor
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Bioconductor/VariantAnnotation
Annotation of Genetic Variants
R - Last pushed - 0 stars - 1 forks
malhamdoosh/EGSEA
This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set ...
R - Last pushed - 4 stars - 1 forks
LTLA/BiocSingular
Clone of the Bioconductor repository for the BiocSingular package.
R - Last pushed - 3 stars
MarioniLab/simpleSingleCell
Clone of the Bioconductor repository for the simpleSingleCell workflow, see http://bioconductor.o...
R - Last pushed - 2 stars - 5 forks
Bioconductor/SummarizedExperiment
SummarizedExperiment container
R - Last pushed - 1 stars - 3 forks
llrs/BaseSet
Provides classes for working with sets
R - Other - Last pushed - 1 stars
waldronlab/TCGAutils
Toolbox package for organizing and working with TCGA data
R - Last pushed - 1 stars - 4 forks
koustav-pal/HiCBricks
R - Other - Last pushed - 1 stars - 1 forks
Bioconductor/GenomicFiles
Distributed computing by file or by range
R - Updated - 0 stars
Bioconductor/AnnotationForge
Code for Building Annotation Database Packages
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Bioconductor/Biobase
Biobase: Base functions for Bioconductor
R - Last pushed - 0 stars
Bioconductor/genefilter
genefilter: methods for filtering genes from high-throughput experiments
R - Updated - 0 stars
kevinrue/GOexpress
Analysies of gene expression data using Gene Ontology
R - Last pushed - 0 stars - 1 forks
Bioconductor/GenomicRanges
Representation and manipulation of genomic intervals and variables defined along a genome
R - Last pushed - 0 stars - 3 forks
Bioconductor/gpls
Classification using generalized partial least squares
R - Last pushed - 0 stars
Bioconductor/graph
graph: A package to handle graph data structures
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Bioconductor/UniProt.ws
R Interface to UniProt Web Services
R - Last pushed - 0 stars
Bioconductor/Category
Category Analysis
R - Last pushed - 0 stars
Bioconductor/Icens
NPMLE for Censored and Truncated Data
R - Updated - 0 stars
Bioconductor/hypergraph
A package providing hypergraph data structures
R - Last pushed - 0 stars