mygene
Python Client for MyGene.Info services.
Latest release 3.2.1 - Updated - 52 stars
multiqc
Create aggregate bioinformatics analysis reports across many samples and tools
Latest release 1.10.1 - Updated - 714 stars
cobra
COBRApy is a package for constraint-based modeling of metabolic networks.
Latest release 0.22.0 - Updated - 276 stars
taxize
Taxonomic Information from Around the Web
Latest release 0.9.99 - Updated - 199 stars
kipoi
Kipoi: model zoo for genomics
Latest release 0.6.31 - Updated - 174 stars
hgvs
HGVS Parser, Formatter, Mapper, Validator
Latest release 1.5.1 - Updated - 115 stars
indra
Integrated Network and Dynamical Reasoning Assembler
Latest release 1.20.0 - Updated - 107 stars
BioFSharp
Open source bioinformatics and computational biology toolbox written in F#.
Latest release 2.0.0-beta6 - Updated - 77 stars
BioFSharp.IO
Read/write functions for various biological file formats
Latest release 2.0.0-beta6 - Updated - 77 stars
bionode-ncbi
Node.js module for working with the NCBI API (aka e-utils) using Streams.
Latest release 2.0.1 - Updated - 60 stars
react-ebi-species
React component based on the EBI species icons
Latest release 2.2.1 - Updated - 5 stars
deepchem
Deep learning models for drug discovery, quantum chemistry, and the life sciences.
Latest release 2.6.0.dev20210513153051 - Updated - 2.92K stars
deepchem
Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology
Latest release 2.5.0 - Updated - 2.92K stars
opentrons
The Opentrons API is a simple framework designed to make writing automated biology lab protocols ...
Latest release 4.3.1 - Updated - 205 stars
clustergrammer
This is a clustergram implemented in D3.js. I started from the example http://bost.ocks.org/mike/...
Latest release 1.19.5 - Updated - 155 stars
aicsimageio
Delayed parallel image reading, metadata parsing, and image writing for microscopy formats in pur...
Latest release 4.0.0.dev6 - Updated - 70 stars
amici
Advanced multi-language Interface to CVODES and IDAS
Latest release 0.11.16 - Updated - 52 stars
pyfastx
pyfastx is a python module for fast random access to sequences from plain and gzipped FASTA/Q file
Latest release 0.8.2 - Updated - 52 stars
biothings-client
Python Client for BioThings API services.
Latest release 0.2.6 - Updated - 7 stars
ndex2
Nice CX Python includes a client and a data model.
Latest release 3.4.0 - Updated - 2 stars
deepchem-nightly
Deep learning models for drug discovery, quantum chemistry, and the life sciences.
Latest release 2.4.0rc1.dev20200708163747 - Updated - 2.92K stars
ncbi-genome-download
Download genome files from the NCBI FTP server.
Latest release 0.3.0 - Updated - 476 stars
biojs-template
BioJS template
Latest release 0.1.0 - Updated - 402 stars
biojs
Represent biological data on the web
Latest release 2.0.0 - Published - 402 stars
@gmod/jbrowse
JBrowse - client-side genome browser
Latest release 1.16.6 - Updated - 326 stars
bionode
A Node.js JavaScript library for client and server side bioinformatics
Latest release 4.0.1 - Updated - 262 stars
pyGeno
A python package for Personalized Genomics and Proteomics
Latest release 2.0.0 - Updated - 236 stars
ntseq
Nucleotide sequence manipulation and analysis library
Latest release 1.1.0 - Updated - 187 stars
Bio
Bioinformatics and Computational Biology Infrastructure for Julia
Latest release v0.4.7 - Published - 182 stars
wikidataintegrator
Python package for reading and writing to/from Wikidata
Latest release 0.8.17 - Updated - 146 stars
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