biopython
Freely available tools for computational molecular biology.
Latest release 1.78 - Updated - 2.7K stars
org.biojava:biojava-alignment
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
Latest release 6.0.0-alpha3 - Updated - 440 stars
org.biojava:biojava-core
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
Latest release 6.0.0-alpha3 - Updated - 440 stars
org.biojava:biojava-structure
The protein structure modules of BioJava.
Latest release 6.0.0-alpha3 - Updated - 440 stars
org.biojava:biojava-structure-gui
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
Latest release 6.0.0-alpha3 - Updated - 440 stars
mappy
Minimap2 python binding
Latest release 2.18 - Updated - 935 stars
org.biojava:biojava-ws
This module deals with bioinformatics web services that could be used to process Biojava objects ...
Latest release 6.0.0-alpha3 - Updated - 440 stars
org.biojava:biojava-ontology
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
Latest release 6.0.0-alpha3 - Updated - 440 stars
org.biojava:biojava-modfinder
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
Latest release 6.0.0-alpha3 - Updated - 440 stars
org.biojava:biojava
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
Latest release 6.0.0-alpha3 - Updated - 440 stars
org.biojava:biojava-genome
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
Latest release 6.0.0-alpha3 - Updated - 440 stars
edlib
Lightweight, super fast library for sequence alignment using edit (Levenshtein) distance.
Latest release 1.3.8.post2 - Updated - 299 stars
org.biojava:biojava-integrationtest
A module which only has the purpose to run slow running integration tests. They can be executed b...
Latest release 6.0.0-alpha3 - Updated - 440 stars
org.biojava:biojava-protein-disorder
This module is for predicting disordered regions in protein sequences
Latest release 6.0.0-alpha3 - Updated - 440 stars
org.biojava:biojava-survival
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
Latest release 6.0.0-alpha3 - Updated - 440 stars
org.biojava:biojava-aa-prop
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
Latest release 6.0.0-alpha3 - Updated - 440 stars
org.biojava:biojava-phylo
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
Latest release 5.0.0-alpha6 - Updated - 440 stars
org.biojava:biojava-sequencing
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
Latest release 5.0.0-alpha9 - Updated - 440 stars
vsearch
Versatile open-source tool for microbiome analysis
Latest release 2.15.2 - Published - 442 stars
open-vector-editor
Teselagen's Open Source Vector Editor
Latest release 16.1.31 - Updated - 83 stars
bwa
Burrow-Wheeler Aligner for pairwise alignment of DNA
Latest release 0.7.17 - Published - 959 stars
bistring
Bidirectionally transformed strings
Latest release 0.4.0 - Updated - 324 stars
sequenceserver
SequenceServer lets you rapidly set up a BLAST+ server with an intuitive user interface for use l...
Latest release 2.0.0.rc8 - Updated - 194 stars
seqalign
Collection of sequence alignment algorithms.
Latest release 1.0.3 - Updated - 12 stars
lexicon-mono-seq
LexiconMonoSeq, DOM Text based MSA visualization written in Javascript
Latest release 1.4.1 - Updated - 10 stars
biopython
Biopython is a collection of freely available Python tools for computational molecular biology
Latest release 1.77 - Updated - 2.7K stars
bistring
Bidirectionally transformed strings
Latest release 0.4.0 - Updated - 324 stars
pyMSA
Scoring Multiple Sequence Alignments with Python
Latest release 1.0.0 - Updated - 5 stars
graphic-smith-waterman
Javascript implementation of the Smith-Waterman algorithm.
Latest release 2.0.2 - Updated - 3 stars
needleman-wunsch
Collection of sequence alignment algorithms.
Latest release 1.0.0 - Published - 12 stars
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