pyensembl
Python interface to ensembl reference genome metadata
Latest release 1.8.7 - Updated - 215 stars
varcode
Variant annotation in Python
Latest release 1.0.2 - Updated - 47 stars
mhctools
Python interface to running command-line and web-based MHC binding predictors
Latest release 1.7.1 - Updated - 41 stars
mhcflurry
MHC Binding Predictor
Latest release 1.6.1 - Updated - 81 stars
flowdec
TensorFlow Implementations of Signal Deconvolution Algorithms
Latest release 1.1.0 - Updated - 48 stars
pepdata
Immunological peptide datasets and amino acid properties
Latest release 1.0.7 - Updated - 33 stars
vaxrank
Mutant peptide ranking for personalized cancer vaccines
Latest release 1.3.0 - Updated - 32 stars
mongo-connector-postgresql
Doc Manager Postgresl for Mongo connector Distribution Utilities
Latest release 1.4.1 - Updated - 27 stars
gtfparse
GTF Parsing
Latest release 1.2.0 - Updated - 19 stars
topiary
Predict cancer epitopes from cancer sequence data
Latest release 3.0.6 - Updated - 13 stars
isovar
Determine mutant protein sequences from RN using assembly around variants
Latest release 1.1.0 - Updated - 13 stars
datacache
Helpers for transparently downloading datasets
Latest release 1.1.5 - Updated - 2 stars
ycimpute
Matrix completion and feature imputation algorithms
Latest release 0.2 - Updated - 38 stars
XML2Dict
Convert between XML String and Python Dict
Latest release 0.2.2 - Updated - 25 stars
varlens
commandline manipulation of genomic variants and NGS reads
Latest release 0.0.2 - Updated - 14 stars
mhcnames
Python library for MHC nomenclature parsing
Latest release 0.4.8 - Updated - 1 stars
serializable
Base class with serialization helpers for user-defined Python objects
Latest release 0.2.1 - Updated
cimcb
This is a pre-release.
Latest release 1.0.39 - Updated
sercol
Rich collection class with grouping and filtering helpers
Latest release 0.1.4 - Updated
deva
data eval in future
Latest release 0.9.8 - Updated - 4 stars
rssynergia
Support tools for Synergia
Latest release 20180115.103457 - Updated - 1 stars
typechecks
Helper functions for runtime type checking
Latest release 0.1.0 - Updated
scalarmix
Scalar bimodal Gaussian mixture models
Latest release 1.0.0 - Updated
epitopes
Python interface to IEDB and other immune epitope data
Latest release 0.3.2 - Updated - 33 stars
nitratexml2dict
Convert between XML String and Python Dict
Latest release 0.2.2 - Published - 25 stars
xml2dictnitrate
Convert between XML String and Python Dict
Latest release 0.2.2 - Published - 25 stars
pepnet
Neural networks for amino acid sequences
Latest release 0.3.2 - Updated - 4 stars
caine
supporting actors offer concurrent inbox processing
Latest release 0.1.12 - Updated - 2 stars
bnlcrl
CRL simulator
Latest release 20180115.183948 - Updated
mutexp
Predict mutation-specific expression from DNA features
Latest release 1.0.1 - Published
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