The goal of scregclust is to cluster genes by regulatory programs. To do so, genes are clustered into modules which in turn are associated with regulators. The algorithm alternates between associating regulators to modules and reallocating target genes into modules.

• The documentation for this package can be found at https://scmethods.github.io/scregclust
• A detailed description of the algorithm and an in-depth evaluation of its properties can be found in our pre-print on bioRxiv

You can install the development version of scregclust from GitHub with:

# install.packages("devtools")
devtools::install_github("scmethods/scregclust")