This is the pax-db.org orthology API npm module.
Example usage:
const opts = {server:'http://neo4j:7474',user:'neo4j',pass:'secret'};
const orth = require('paxdb-orthology-lib')(opts);
orth.count('Protein').then(numProteins => console.log(`num proteins: ${numProteins}`));
orth.loadOrthologs('9606.ENSP00000356969', 'PRIMATES', 'BRAIN').
then(cogs => console.log(`orthologs: ${JSON.stringify(cogs)}`));
Installation
npm install paxdb-orthology-lib
Versioning
All versions are <major>.<minor>.<patch>, where major and minor follow
pax-db.org versions.
License
MIT. See "LICENSE.txt".
