CartiMorph-nnUNet

nnU-Net with minor revisions tailored for the CartiMorph framework.


Keywords
deep, learning, image, segmentation, medical, analysis, nnU-Net, nnunet
Licenses
Apache-2.0/libpng-2.0
Install
pip install CartiMorph-nnUNet==1.7.15

Documentation

CartiMorph-nnUNet

A work based on nnUNet (1.7.0)

Installation

pip install CartiMorph-nnUNet

check the installation with

python -c "import CartiMorph_nnUNet as nnUnet; print(nnUnet.__file__)"  

Application:

CartiMorph-nnUNet is used in our research projects:

  • CartiMorph: a framework for automated knee articular cartilage morphometrics
  • CartiMorph Toolbox: a platform for model training, model inference, transfer learning, and medical image computing