NVR

python implementation of gene feature selection used in Welch et al.,2016


License
GPL-2.0
Install
pip install NVR==0.0.6

Documentation

NVR (neighborhood variance ratio)

Python implementation of NVR (neighborhood variance ratio) gene selection to select genes with local and monotonic variation (Welch et al., 2016). The selected genes possess specific expression patterns over the entire data space amenable to trajectory analysis.

Installation for Mac or Linux

There are two ways to install p-Creode with Mac/Linux operating systems.

git clone git://github.com/KenLauLab/NVR
cd NVR
sudo pip install .
sudo pip install nvr