Using classes and methods in anclib.py it is possible to parse and analyze text files containing results related to ancestral reconstruction of DNA or protein sequences. (Rudimentary - beginning of project)
The anclib.py source code is available on GitHub: https://github.com/agormp/anclib and can be installed from PyPI: https://pypi.org/project/anclib/
python3 -m pip install anclib
Upgrading to latest version:
python3 -m pip install --upgrade anclib
The anclib library depends on these other python modules, which are automatically included when using pip to install:
- phylotreelib library
- sequencelib library
- NumPy package
- pandas library
- rpy2 package
- Levenshtein Python C extension module
The anclib.py library requires R to be installed, along with the following R-packages:
To be written