Using classes and methods in anclib.py it is possible to parse and analyze text files containing results related to ancestral reconstruction of DNA or protein sequences. (Rudimentary - beginning of project)

The anclib.py source code is available on GitHub: https://github.com/agormp/anclib and can be installed from PyPI: https://pypi.org/project/anclib/

python3 -m pip install anclib

Upgrading to latest version:

python3 -m pip install --upgrade anclib

The anclib library depends on these other python modules, which are automatically included when using pip to install:

• phylotreelib library
• sequencelib library
• NumPy package
• pandas library
• rpy2 package
• Levenshtein Python C extension module

The anclib.py library requires R to be installed, along with the following R-packages:

• tidyverse
• ape
• tidytree

To be written