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bam2x
Release 0.2.6

bionformatics python lib for query bam files, this version set matplotlib as optional.

Homepage Repository PyPI Python

License: GPL-3.0
Install: pip install bam2x==0.2.6

Documentation

bam2x

bam2x provides a nice command line interface for analyzing NGS data.

Library Dependencies:

pysam
twobitreader (needed for querying 2bit files)
bxpython (optional, needed for querying bigwig files)
bitarray
numpy

Optional Dependency:

matplotlib

bam2x branch is a working branch master branch is release branch xplib branch contains old scripts

Dependencies: 0
Dependent packages: 0
Dependent repositories: 0
Total releases: 17
Latest release: Dec 1, 2017
First release: Feb 15, 2014
Stars: 10
Forks: 13
Watchers: 11
Contributors: 4
Repository size: 5.19 MB
SourceRank: 8

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Releases

0.1: Dec 15, 2021
0.2.6: Dec 1, 2017
0.2.5: Nov 6, 2015
0.2.4: Sep 25, 2014
0.2.3: Sep 9, 2014
0.2.2: Jul 2, 2014
0.2.1: Jun 30, 2014
0.2.0: Jun 27, 2014
0.1.9: May 23, 2014
0.1.8: May 22, 2014

See all 17 releases

Contributors

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