Author: Jingcheng Yang

Email: yjcyxky@163.com

Date: 2018-12-13

Biovis Media Extension

Summary

Display dynamic plot or more multimedia content in markdown.

Biovis-media-extension is an extension for Python-Markdown. It can launch dynamic plot or preprocess multimedia.

Dependencies

Biovis requires Python 3+ and Python-Markdown to be loaded in your environment in order for full functionality to work.

Syntax

@boxplot-r(dataFile='boxplot-r.rds', dataType='rds', title='',
           xAxis='DoubleBlind_0to24', xTitle='DoubleBlind_0to24',
           xAngle=90, yAxis='HbA1c_DF24to0', yTitle='HbA1c_DF24to0',
           colorAttr='DoubleBlind_0to24', subtitle='', text='')

Such as @plugin-name(arg1=value, arg2=value)

Installation

pip install biovis-media-extension

Plugins

1. boxplot-r: Interactive boxplot visualization from a Shiny app(r version).
2. corrplot-r: Interactive correlation plot visualization from a Shiny app(r version).
3. data-table-js: Another interactive data table. It is based on datatables js library.
4. density-plot: Interactive density plot visualization from a Shiny app(r version).
5. group-boxplot: Interactive group-boxplot visualization from a Shiny app(r version).
6. pivot-table-js: Interactive pivot-table and pivot-chart. It is based on webdatarocks and highcharts.
7. rocket-plot-r: Interactive rocket plot visualization from a Shiny app(r version).
8. stack-barplot-r: Interactive stack barplot visualization from a Shiny app(r version).
9. upset-r: Interactive upset plot visualization from a Shiny app(r version).
10. violin-plot-r: Interactive violin plot visualization from a Shiny app(r version).