cansig

Discovering de novo shared transcriptional programs in single cancer cells


Keywords
cancer-research, computational-biology, deep-generative-modelling, representation-learning, single-cell-rna-seq
License
BSD-3-Clause
Install
pip install cansig==0.3.1

Documentation

build docs-deploy PyPI Code style: black

CanSig: Discovering de novo shared transcriptional programs in single cancer cells

A pipeline for single-cell cancer data sets analysis.

This repository accompanies our preprint.

Resources

Installation

$ pip install cansig

More information can be found in the Getting started section of our documentation.

Code contributors

To open-source the code, Git history was truncated. Hence, GitHub's statistics do not faithfully summarize the contributions. All persons listed below made major contributions to the code.