coptr

Accurate and robust inference of microbial growth dynamics from metagenomic sequencing reads.


Keywords
growth, rate, peak-to-trough, ratio
License
CNRI-Python-GPL-Compatible
Install
pip install coptr==1.1.4

Documentation

CoPTR is a tool for estimating peak-to-trough ratios from metagenomic sequencing.

You can find our documentation on Read The Docs: https://coptr.readthedocs.io