git clone https://github.com/kapoorlab/embryoseg/

cd embryoseg

pip install --user -e .

# or, to install in editable mode AND grab all of the developer tools
# (this is required if you want to contribute code back to NapaTrackMater)
pip install --user -r requirements.txt

# install pipenv if you don't already have it installed
pip install --user pipenv

# clone the repository and sync the dependencies
git clone https://github.com/kapoorlab/embryoseg/
cd embryoseg
pipenv sync

# make the current package available
pipenv run python setup.py develop

# you can run the example notebooks by starting the jupyter notebook inside the virtual env
pipenv run jupyter notebook