EVALUATION TOOL FOR CELL SEGMENTATION AND TRACKING

version 1.2.0

Requirements

• Python version 2.7, 3.7
• PIL (python library)
• Gnuplot (should be available from command line)
• Tested only on Windows XP and Mac OS X 10.7.5 and Ubuntu

See wiki for more information (poster on Image Bioinformatics).

See ep.ReadMe.txt for more detailed information about installation and usage.

Tool was created and used for evaluation of the algorithms in http://yeast-image-toolkit.biosim.eu/ comparison.

"Yeast Image Toolkit: A benchmark and evaluation strategy for yeast segmentation and tracking algorithms", S. Stoma and F. Mroz and A. Kaczmarek, Image Bioinformatics, Leuven, Belgium, 2014.