fcswrite

fcswrite allows you to write .fcs files, a file format used in flow cytometry. Currently, fcswrite partially supports the FCS3.0 file format - Contributions to fcswrite are welcome.

Compatibility

fcswrite was tested (not thoroughly) with these softwares/libraries:

• FlowJo: https://www.flowjo.com/
• Flowing Software: http://flowingsoftware.btk.fi
• fcsparser: https://pypi.org/project/fcsparser/ (and thus FlowCytometryTools)
• Python Flow Cytometry (FCM) Tools: https://pypi.python.org/pypi/fcm (please note that FCM is horribly outdated)

Installation

Install with pip:

pip install fcswrite

Requirements:

• Python >= 3.6
• numpy

Testing

Running tests

python setup.py test