Galaxyservers

This package is a release supporting the poster presentation at GCC2013/Oslo. The work is still in progres, we will incremently add servers and installation instructions to this package.

Installation

To install this package you will need either root access or preferabel install into your virtualenv.

Installation of WSGI-servers

Some of the WSGI-server require supplementary installation of supporting software/libraries.

One common package to install is python-dev, this can be installed by:

sudo apt-get install python-dev build-essential

On Debian/Ubuntu based systems.

Fapws3

In order to install Fapws3, you need to install 1 system package called 'libev'. This packages handles the event-based system calls.

sudo apt-get install libev libev-dev

Inside your virtualenv, installation of Fapws3 is done by:

pip install fapws3

Thats all! Once installed, proceed with configuring your Galaxy instance

Gunicorn

Installation of Gunicorn also requires the installation of the python-dev library headers. Install the following into your virtualenv: (or even system-wide)

pip install greenlet gunicorn

That's all!

Tornado

pip install tornado

uWSGI

pip install uwsgi

Configuring your Galaxy instance

Open universe_wsgi.ini and search for the following section:

[server:main]
use = egg:Paste#http

You can replace the egg:Paste#http by any server supported by this package:

[server:main]
use = egg:galaxyservers#gunicorn
# you can replace gunicorn by: fapws3/tornado

one exception

uWSGI requires a slightly different setup.