ibd-dendrogram

module that helps to form a dendrogram


Keywords
python, dendrogram, IBD, genetics, relatedness
Install
pip install ibd-dendrogram==0.12.4

Documentation

Code style: black PyPI version Documentation Status

ibd-dendrogram:

A python module to help users create a distance matrix and construct a dendrogram using Identity by Descent segments as a distance marker. The default distance is calculated as 1/(shared ibd segment length). Documentation explaining the api can be found here: ibd-dendrogram docs

This module has four accessible methods: make_distance_matrix, record_matrix, generate_dendrogram, draw_dendrogram.