imageCLEFfsei

tools used for imageCLEF2019 Challenge


Keywords
imageclef, fsei, tuberculosis, challenge, deeplearning, medical, imaging
License
MIT
Install
pip install imageCLEFfsei==0.1

Documentation

imageCLEFfsei

This repository holds work related to imageCLEF TBT task

Extract Sclices

make sure to make extract_slices.sh executable:

sudo chmod 775 extract_slices.sh

here is an example of the script call:

./extract_slices.sh /destinationTo/NiiData/ /DestinationTo/output/ nii.gz jpg /DestinationTo/Data/TestSet_metaData.csv