pan_genomics_download
pgd, short for pan_genomics_download, is a convenient command line tool to download all files from pan.genomics.cn using a shared link.
Installation
From pypi
$ pip install pan-genomcis-download
From github
$ git clone https://github.com/JaylanLiu/pan-genomcis-download
$ cd pan-genomcis-download
$ python setup.py install
Usage
$ pgd -h
usage: pgd [-h] -u URL [-o TARGET_PATH] [-s SUFFIX] [-f]
pan-genomics_download
optional arguments:
-h, --help show this help message and exit
-u URL, --url URL shared link
-o TARGET_PATH, --target_path TARGET_PATH
target path to store files
-s SUFFIX, --suffix SUFFIX
allowed file suffix
-f, --flat ignore the directory hierarchy and download all files to target path directly
Example
$pgd -u https://pan.genomics.cn/ucdisk/s/Qzaxxxxxxx
2021-06-18 14:51:02,091 - pan_genomics_download.py[line:38] - INFO: get files list successfully
2021-06-18 14:51:03,042 - pan_genomics_download.py[line:84] - INFO: ./生信分析文件/2021年6月/f300007033_202106151126.zip download successfully
2021-06-18 14:51:03,801 - pan_genomics_download.py[line:84] - INFO: ./生信分析文件/2021年6月/F300007060_202106091332.zip download successfully
2021-06-18 14:51:06,400 - pan_genomics_download.py[line:84] - INFO: ./生信分析文件/2021年5月/F300007070_202105240906分析文件.zip download successfully
